Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.86□□□□□ -1.31
VTNP04004 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VTNP04004 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VTNP04004 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
VTNP04004 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.86□□□□□ -1.31
VTNP04004 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.86□□□□□ -1.31
VTNP04004 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VTNP04004 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
VTNP04004 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 SALL4P7-201ENST00000555779 3120 ntBASIC6.85□□□□□ -1.31
VTNP04004 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 AL445238.1-204ENST00000400311 463 ntBASIC6.85□□□□□ -1.31
VTNP04004 AL132875.1-201ENST00000403623 949 ntBASIC6.85□□□□□ -1.31
VTNP04004 RPS29P14-201ENST00000431518 171 ntBASIC6.85□□□□□ -1.31
VTNP04004 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.85□□□□□ -1.31
VTNP04004 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.85□□□□□ -1.31
VTNP04004 HLA-DPA3-207ENST00000454398 229 ntBASIC6.85□□□□□ -1.31
VTNP04004 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.85□□□□□ -1.31
VTNP04004 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.85□□□□□ -1.31
VTNP04004 UGT2A3P7-201ENST00000510485 734 ntBASIC6.85□□□□□ -1.31
VTNP04004 AC090958.1-201ENST00000511122 351 ntBASIC6.85□□□□□ -1.31
VTNP04004 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.85□□□□□ -1.31
VTNP04004 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
VTNP04004 AC073916.1-201ENST00000545095 130 ntBASIC6.85□□□□□ -1.31
VTNP04004 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.85□□□□□ -1.31
VTNP04004 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 AC016542.2-201ENST00000624201 619 ntBASIC6.85□□□□□ -1.31
VTNP04004 SNX18P12-201ENST00000624821 759 ntBASIC6.85□□□□□ -1.31
VTNP04004 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.85□□□□□ -1.31
VTNP04004 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.85□□□□□ -1.31
VTNP04004 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.85□□□□□ -1.31
VTNP04004 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VTNP04004 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 AL391262.1-201ENST00000556558 1992 ntBASIC6.84□□□□□ -1.31
VTNP04004 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VTNP04004 SEPT7P2-202ENST00000398921 823 ntBASIC6.84□□□□□ -1.31
VTNP04004 RNA5SP156-201ENST00000410250 110 ntBASIC6.84□□□□□ -1.31
VTNP04004 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.84□□□□□ -1.31
VTNP04004 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.84□□□□□ -1.31
VTNP04004 CST12P-201ENST00000457644 362 ntBASIC6.84□□□□□ -1.31
VTNP04004 SNX18P26-201ENST00000458433 740 ntBASIC6.84□□□□□ -1.31
VTNP04004 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 OR5H7P-201ENST00000514084 930 ntBASIC6.84□□□□□ -1.31
VTNP04004 PRMT5P1-201ENST00000514351 598 ntBASIC6.84□□□□□ -1.31
VTNP04004 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.84□□□□□ -1.31
VTNP04004 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.84□□□□□ -1.31
VTNP04004 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.84□□□□□ -1.31
VTNP04004 AC233702.7-202ENST00000582941 211 ntBASIC6.84□□□□□ -1.31
VTNP04004 AC027229.1-201ENST00000583887 253 ntBASIC6.84□□□□□ -1.31
VTNP04004 FO681491.1-202ENST00000623392 737 ntBASIC6.84□□□□□ -1.31
VTNP04004 AC012254.5-201ENST00000623573 478 ntBASIC6.84□□□□□ -1.31
VTNP04004 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
VTNP04004 PSG10P-201ENST00000501199 1500 ntBASIC6.84□□□□□ -1.31
VTNP04004 BIN2P1-201ENST00000504996 1530 ntBASIC6.84□□□□□ -1.31
VTNP04004 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
VTNP04004 AC105749.1-201ENST00000631338 2008 ntBASIC6.84□□□□□ -1.31
VTNP04004 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.84□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms