Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 AC097173.1-201ENST00000505862 819 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC8.66□□□□□ -1.02
HOXA2O43364 MRPL40P1-201ENST00000542687 604 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 OR4N1P-201ENST00000554847 949 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.66□□□□□ -1.02
HOXA2O43364 RN7SL82P-201ENST00000611435 237 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 AC116165.3-201ENST00000614524 400 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 TUG1_3.1-201ENST00000616187 237 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 RN7SL628P-201ENST00000619139 237 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 AP000577.1-201ENST00000624366 878 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXA2O43364 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXA2O43364 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
HOXA2O43364 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.66□□□□□ -1.02
HOXA2O43364 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXA2O43364 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.66□□□□□ -1.02
HOXA2O43364 AC006026.1-201ENST00000444025 1803 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
HOXA2O43364 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
HOXA2O43364 AC012467.2-201ENST00000607783 2583 ntBASIC8.66□□□□□ -1.02
HOXA2O43364 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 CR383658.2-201ENST00000547576 1525 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC061975.5-201ENST00000584928 1441 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
HOXA2O43364 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC137056.2-201ENST00000624055 1958 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 OR7E25P-202ENST00000641088 5937 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 ZBTB8OSP1-201ENST00000342688 498 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 Y_RNA.263-201ENST00000364659 114 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 SNORA30B-201ENST00000365319 129 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 PKMP3-201ENST00000405497 715 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 LINC01347-201ENST00000417964 355 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC011753.4-201ENST00000417974 311 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 MED15P9-201ENST00000424716 533 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 OR5M13P-201ENST00000433944 937 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC242426.1-201ENST00000435270 960 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC8.65□□□□□ -1.02
HOXA2O43364 UBE2V1P3-201ENST00000439651 417 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AL512593.1-201ENST00000444758 779 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC007677.1-201ENST00000445757 515 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 OR2M3-201ENST00000456743 1061 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
HOXA2O43364 RN7SL869P-201ENST00000497032 300 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AK6-204ENST00000512561 587 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.65□□□□□ -1.02
HOXA2O43364 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 Y_RNA.701-201ENST00000516812 110 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC8.65□□□□□ -1.02
HOXA2O43364 OR5AK1P-201ENST00000524837 922 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 YWHABP2-201ENST00000540201 713 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC8.65□□□□□ -1.02
HOXA2O43364 EIF4A1P9-201ENST00000576035 1207 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC022239.4-201ENST00000602626 504 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AL121655.1-201ENST00000605811 308 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 AL158209.2-201ENST00000619266 216 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC8.65□□□□□ -1.02
HOXA2O43364 AC241377.2-202ENST00000636462 997 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 AC245505.2-201ENST00000553572 3055 ntBASIC8.65□□□□□ -1.02
HOXA2O43364 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
HOXA2O43364 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
HOXA2O43364 AC100810.3-201ENST00000633189 2240 ntBASIC8.65□□□□□ -1.03
HOXA2O43364 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.03
HOXA2O43364 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
HOXA2O43364 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HOXA2O43364 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.65□□□□□ -1.03
HOXA2O43364 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
HOXA2O43364 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC8.65□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms