Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC10.66□□□□□ -0.7
CUX2O14529 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC10.66□□□□□ -0.7
CUX2O14529 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
CUX2O14529 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CUX2O14529 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC10.65□□□□□ -0.7
CUX2O14529 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC10.65□□□□□ -0.7
CUX2O14529 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC10.65□□□□□ -0.7
CUX2O14529 Z68868.1-201ENST00000429048 544 ntBASIC10.65□□□□□ -0.7
CUX2O14529 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC10.65□□□□□ -0.7
CUX2O14529 AC012075.1-201ENST00000436549 580 ntBASIC10.65□□□□□ -0.7
CUX2O14529 RPS11P7-201ENST00000442125 465 ntBASIC10.65□□□□□ -0.7
CUX2O14529 SEPT14P12-201ENST00000442280 560 ntBASIC10.65□□□□□ -0.7
CUX2O14529 AC134698.5-201ENST00000519444 336 ntBASIC10.65□□□□□ -0.7
CUX2O14529 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC10.65□□□□□ -0.7
CUX2O14529 AP001858.2-201ENST00000536213 601 ntBASIC10.65□□□□□ -0.7
CUX2O14529 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC10.65□□□□□ -0.7
CUX2O14529 OR1F2P-201ENST00000570470 933 ntBASIC10.65□□□□□ -0.7
CUX2O14529 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC10.65□□□□□ -0.7
CUX2O14529 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC10.65□□□□□ -0.7
CUX2O14529 AC133644.2-201ENST00000608142 540 ntBASIC10.65□□□□□ -0.7
CUX2O14529 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC10.65□□□□□ -0.7
CUX2O14529 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CUX2O14529 KYNUP3-201ENST00000574386 1341 ntBASIC10.65□□□□□ -0.71
CUX2O14529 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CUX2O14529 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CUX2O14529 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC10.65□□□□□ -0.71
CUX2O14529 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 BTK-209ENST00000618050 2417 ntTSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CUX2O14529 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 RPS7P8-201ENST00000418311 581 ntBASIC10.64□□□□□ -0.71
CUX2O14529 RPS26P13-201ENST00000419030 330 ntBASIC10.64□□□□□ -0.71
CUX2O14529 EIF4A1P7-201ENST00000421800 1220 ntBASIC10.64□□□□□ -0.71
CUX2O14529 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC10.64□□□□□ -0.71
CUX2O14529 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC10.64□□□□□ -0.71
CUX2O14529 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
CUX2O14529 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 ZSWIM5P3-201ENST00000511265 2743 ntBASIC10.64□□□□□ -0.71
CUX2O14529 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CUX2O14529 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CUX2O14529 DYNC1I2P1-201ENST00000435916 1838 ntBASIC10.63□□□□□ -0.71
CUX2O14529 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC10.63□□□□□ -0.71
CUX2O14529 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC10.63□□□□□ -0.71
CUX2O14529 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CUX2O14529 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC10.63□□□□□ -0.71
CUX2O14529 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 RNA5SP394-201ENST00000364216 119 ntBASIC10.63□□□□□ -0.71
CUX2O14529 MIR1204-201ENST00000408388 67 ntBASIC10.63□□□□□ -0.71
CUX2O14529 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC10.63□□□□□ -0.71
CUX2O14529 CEACAMP9-201ENST00000442990 513 ntBASIC10.63□□□□□ -0.71
CUX2O14529 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
CUX2O14529 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC10.63□□□□□ -0.71
CUX2O14529 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC10.63□□□□□ -0.71
CUX2O14529 OR4A13P-201ENST00000529316 942 ntBASIC10.63□□□□□ -0.71
CUX2O14529 PCNAP4-201ENST00000532690 730 ntBASIC10.63□□□□□ -0.71
CUX2O14529 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC10.63□□□□□ -0.71
CUX2O14529 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC10.63□□□□□ -0.71
CUX2O14529 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
CUX2O14529 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CUX2O14529 AC009237.3-203ENST00000442128 3551 ntBASIC10.63□□□□□ -0.71
CUX2O14529 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 AC062029.1-202ENST00000606164 3651 ntBASIC10.63□□□□□ -0.71
CUX2O14529 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC10.63□□□□□ -0.71
CUX2O14529 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
CUX2O14529 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CUX2O14529 AC011379.1-201ENST00000508713 3025 ntBASIC10.62□□□□□ -0.71
CUX2O14529 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CUX2O14529 METTL15P3-201ENST00000415522 1221 ntBASIC10.62□□□□□ -0.71
CUX2O14529 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC10.62□□□□□ -0.71
CUX2O14529 AL445466.1-201ENST00000448432 357 ntBASIC10.62□□□□□ -0.71
CUX2O14529 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.62□□□□□ -0.71
CUX2O14529 RN7SL97P-201ENST00000486780 299 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms