Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PRELID1P1-201ENST00000403549 660 ntBASIC6.76□□□□□ -1.33
O00370 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
O00370 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 RPL7AP51-201ENST00000422016 760 ntBASIC6.76□□□□□ -1.33
O00370 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 DNAJC19P5-201ENST00000443295 316 ntBASIC6.76□□□□□ -1.33
O00370 OR2L9P-201ENST00000444456 913 ntBASIC6.76□□□□□ -1.33
O00370 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.76□□□□□ -1.33
O00370 GUSBP9-201ENST00000510138 584 ntBASIC6.76□□□□□ -1.33
O00370 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.76□□□□□ -1.33
O00370 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 AC009729.1-201ENST00000548873 1133 ntBASIC6.76□□□□□ -1.33
O00370 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.76□□□□□ -1.33
O00370 MIR4420-201ENST00000583944 77 ntBASIC6.76□□□□□ -1.33
O00370 WBP1LP11-201ENST00000586141 328 ntBASIC6.76□□□□□ -1.33
O00370 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
O00370 WBP1LP12-201ENST00000604449 331 ntBASIC6.76□□□□□ -1.33
O00370 AL049840.6-201ENST00000604583 345 ntBASIC6.76□□□□□ -1.33
O00370 AC018690.1-201ENST00000608144 626 ntBASIC6.76□□□□□ -1.33
O00370 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.76□□□□□ -1.33
O00370 AL445649.1-201ENST00000615941 691 ntBASIC6.76□□□□□ -1.33
O00370 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.76□□□□□ -1.33
O00370 CCAT2-201ENST00000630920 1752 ntBASIC6.76□□□□□ -1.33
O00370 RPS2P45-201ENST00000469997 2057 ntBASIC6.76□□□□□ -1.33
O00370 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
O00370 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
O00370 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.76□□□□□ -1.33
O00370 MAPK10-287ENST00000641217 3037 ntBASIC6.76□□□□□ -1.33
O00370 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
O00370 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.76□□□□□ -1.33
O00370 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.76□□□□□ -1.33
O00370 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
O00370 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.75□□□□□ -1.33
O00370 AC119674.1-213ENST00000641177 1386 ntBASIC6.75□□□□□ -1.33
O00370 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
O00370 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.75□□□□□ -1.33
O00370 AC114982.2-201ENST00000461396 358 ntBASIC6.75□□□□□ -1.33
O00370 RN7SL643P-201ENST00000471845 291 ntBASIC6.75□□□□□ -1.33
O00370 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 AC117500.1-201ENST00000497352 755 ntBASIC6.75□□□□□ -1.33
O00370 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.75□□□□□ -1.33
O00370 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.75□□□□□ -1.33
O00370 AC116917.1-201ENST00000520558 305 ntBASIC6.75□□□□□ -1.33
O00370 IGHV4-55-201ENST00000520889 368 ntBASIC6.75□□□□□ -1.33
O00370 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 AC093524.1-201ENST00000564266 1094 ntBASIC6.75□□□□□ -1.33
O00370 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.75□□□□□ -1.33
O00370 AC011891.2-201ENST00000604949 397 ntBASIC6.75□□□□□ -1.33
O00370 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.75□□□□□ -1.33
O00370 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.75□□□□□ -1.33
O00370 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
O00370 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
O00370 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
O00370 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
O00370 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.75□□□□□ -1.33
O00370 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
O00370 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.74□□□□□ -1.33
O00370 LINC01613-201ENST00000561476 2780 ntBASIC6.74□□□□□ -1.33
O00370 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
O00370 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
O00370 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.74□□□□□ -1.33
O00370 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
O00370 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
O00370 AC116036.1-201ENST00000412199 367 ntBASIC6.74□□□□□ -1.33
O00370 EMC3-AS1-205ENST00000438698 534 ntBASIC6.74□□□□□ -1.33
O00370 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.74□□□□□ -1.33
O00370 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.74□□□□□ -1.33
O00370 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.74□□□□□ -1.33
O00370 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.74□□□□□ -1.33
O00370 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
O00370 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.74□□□□□ -1.33
O00370 AC128716.1-201ENST00000475129 166 ntBASIC6.74□□□□□ -1.33
O00370 RN7SL714P-201ENST00000487050 298 ntBASIC6.74□□□□□ -1.33
O00370 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.74□□□□□ -1.33
O00370 USP9YP2-201ENST00000504503 1000 ntBASIC6.74□□□□□ -1.33
O00370 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms