Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
HFM1A2PYH4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HFM1A2PYH4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
HFM1A2PYH4 AL359091.1-201ENST00000449048 1734 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
HFM1A2PYH4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC9.13□□□□□ -0.95
HFM1A2PYH4 PSG10P-201ENST00000501199 1500 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 AC022034.1-201ENST00000512867 2156 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 AC007956.1-201ENST00000555623 542 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 RPA2P1-201ENST00000556557 721 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HFM1A2PYH4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC9.13□□□□□ -0.95
HFM1A2PYH4 AC090236.2-201ENST00000587933 1101 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 AC008521.2-201ENST00000591021 259 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
HFM1A2PYH4 AL645933.2-201ENST00000606743 1207 ntBASIC9.13□□□□□ -0.95
HFM1A2PYH4 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 RN7SKP69-201ENST00000365390 305 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC005077.1-201ENST00000449226 375 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC016027.4-201ENST00000450866 277 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 HLA-DPA3-207ENST00000454398 229 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC073594.1-201ENST00000462065 364 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC106872.4-201ENST00000510050 523 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC027369.2-201ENST00000528030 440 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC068305.2-201ENST00000550567 1205 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AL683813.2-201ENST00000605245 502 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC096861.1-201ENST00000616652 240 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC129915.3-201ENST00000634128 948 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.12□□□□□ -0.95
HFM1A2PYH4 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 AC008957.3-201ENST00000624112 2242 ntBASIC9.12□□□□□ -0.95
HFM1A2PYH4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
HFM1A2PYH4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 RNFT1P3-201ENST00000340898 1052 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 SUGT1P2-201ENST00000379452 992 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 SNORA17A-201ENST00000391185 133 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 AL031985.1-201ENST00000392713 418 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 AL096800.1-201ENST00000405326 893 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC073109.1-201ENST00000445066 978 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 SCARNA21.2-201ENST00000516600 166 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC011445.2-201ENST00000599274 173 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC100767.2-201ENST00000604840 693 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 SNORA17.5-201ENST00000630429 132 ntBASIC9.11□□□□□ -0.95
HFM1A2PYH4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
HFM1A2PYH4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC9.11□□□□□ -0.95
HFM1A2PYH4 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.1□□□□□ -0.95
HFM1A2PYH4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC9.1□□□□□ -0.95
HFM1A2PYH4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
HFM1A2PYH4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms