Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 SNORD115-48-201ENST00000364764 76 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 OR5H15-201ENST00000383696 930 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 RNU6-1215P-201ENST00000384441 102 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 RNU6-1242P-201ENST00000391052 103 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL139806.1-201ENST00000403057 1002 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 ZNF603P-201ENST00000405613 487 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 LARP1P1-201ENST00000407692 292 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 TYMSP1-201ENST00000407851 869 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 RAP1BP1-201ENST00000412709 553 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC244452.1-201ENST00000413798 141 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 MICG-208ENST00000416822 132 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 FTOP1-201ENST00000419363 861 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AJ239321.1-201ENST00000424255 564 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 GAPDHP51-201ENST00000426454 1000 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 BX119917.1-201ENST00000432517 502 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 MORF4L1P5-201ENST00000433352 961 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 GTF2IP7-202ENST00000436677 309 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL356133.1-201ENST00000444762 372 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL671855.1-201ENST00000446875 1203 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC01288-201ENST00000519189 529 ntTSL 4 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 IGLVI-42-201ENST00000522485 381 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AP005597.2-201ENST00000526238 341 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 MTCO2P15-201ENST00000532655 656 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC068631.3-201ENST00000538831 225 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC006518.2-201ENST00000542513 940 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 SETP1-201ENST00000556014 845 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AP001981.2-201ENST00000603241 418 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 AL590229.1-201ENST00000603497 542 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 CR382285.1-202ENST00000604687 547 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC093673.2-201ENST00000609674 331 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC005839.1-201ENST00000624148 3213 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 AC068733.2-201ENST00000605434 1418 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 SF3A3P1-201ENST00000446317 1477 ntBASIC7.67□□□□□ -1.18
RNF43Q68DV7 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC7.67□□□□□ -1.18
RNF43Q68DV7 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RNF43Q68DV7 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF43Q68DV7 AC061975.7-201ENST00000592016 2692 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF43Q68DV7 AC092821.3-202ENST00000641304 2767 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 HSPA8P11-201ENST00000508840 1898 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 SAMMSON-203ENST00000641005 2168 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
RNF43Q68DV7 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF43Q68DV7 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
RNF43Q68DV7 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 RAC1P4-201ENST00000419413 579 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 TRGV5P-201ENST00000419915 354 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 AC124944.2-201ENST00000429866 1242 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC7.66□□□□□ -1.18
RNF43Q68DV7 UBQLN1P1-207ENST00000441056 1169 ntBASIC7.66□□□□□ -1.18
RNF43Q68DV7 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms