Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LHX1P48742 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 MAPK10-287ENST00000641217 3037 ntBASIC6.69□□□□□ -1.34
LHX1P48742 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
LHX1P48742 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 STAG3L4-201ENST00000352103 530 ntBASIC6.69□□□□□ -1.34
LHX1P48742 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX1P48742 GCNT1P4-201ENST00000404096 329 ntBASIC6.69□□□□□ -1.34
LHX1P48742 RN7SKP108-201ENST00000411367 328 ntBASIC6.69□□□□□ -1.34
LHX1P48742 UBE2V1P14-201ENST00000415815 558 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AKR1B10P1-201ENST00000425765 942 ntBASIC6.69□□□□□ -1.34
LHX1P48742 PPIAP10-201ENST00000438675 458 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 OR52I1-201ENST00000450052 1050 ntBASIC6.69□□□□□ -1.34
LHX1P48742 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX1P48742 BLNK-209ENST00000495266 440 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 MTND6P8-201ENST00000503471 522 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX1P48742 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 AC006512.2-201ENST00000543250 486 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX1P48742 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.69□□□□□ -1.34
LHX1P48742 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 AC002310.3-201ENST00000569728 723 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AP005136.2-201ENST00000583253 1049 ntBASIC6.69□□□□□ -1.34
LHX1P48742 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 AP001823.1-201ENST00000604056 1003 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC073389.3-201ENST00000609434 935 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC006924.1-201ENST00000610750 559 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC024255.1-201ENST00000614376 102 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC010809.3-201ENST00000621310 641 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC073488.6-201ENST00000632293 754 ntBASIC6.69□□□□□ -1.34
LHX1P48742 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
LHX1P48742 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
LHX1P48742 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
LHX1P48742 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
LHX1P48742 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 GUCY1B2-204ENST00000531898 1979 ntBASIC6.68□□□□□ -1.34
LHX1P48742 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
LHX1P48742 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.68□□□□□ -1.34
LHX1P48742 SNORA11.5-201ENST00000408163 128 ntBASIC6.68□□□□□ -1.34
LHX1P48742 RNA5SP431-201ENST00000410312 120 ntBASIC6.68□□□□□ -1.34
LHX1P48742 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.68□□□□□ -1.34
LHX1P48742 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.68□□□□□ -1.34
LHX1P48742 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 MIR4701-201ENST00000583094 63 ntBASIC6.68□□□□□ -1.34
LHX1P48742 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.68□□□□□ -1.34
LHX1P48742 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.68□□□□□ -1.34
LHX1P48742 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 AC087269.2-201ENST00000641764 975 ntBASIC6.68□□□□□ -1.34
LHX1P48742 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
LHX1P48742 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
LHX1P48742 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
LHX1P48742 AC005618.1-201ENST00000606901 3148 ntBASIC6.67□□□□□ -1.34
LHX1P48742 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
LHX1P48742 AL031651.1-201ENST00000615357 1438 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms