Protein–RNA interactions for Protein: Q9BYR7

KRTAP3-2, Keratin-associated protein 3-2, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-2Q9BYR7 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 GINS3-202ENST00000328514 1932 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ACKR1-204ENST00000537147 1902 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 NUTM2A-201ENST00000381689 3974 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SULF1-223ENST00000616868 3381 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 REXO1L1P-201ENST00000379010 6598 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 MLC1-202ENST00000395876 3601 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC011479.3-201ENST00000594299 1890 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RHD-210ENST00000622561 3007 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 HDC-201ENST00000267845 2705 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RPH3A-213ENST00000548866 2429 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RNU5F-3P-201ENST00000363767 117 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RNU6-324P-201ENST00000363957 106 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 USF1-201ENST00000368019 998 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 MBD3L2-201ENST00000381393 793 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AP000356.3-201ENST00000382243 753 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 U8.10-201ENST00000384260 133 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RNU6-225P-201ENST00000384613 103 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RNA5SP136-201ENST00000410906 107 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RN7SKP252-201ENST00000411210 327 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 GPAA1P2-201ENST00000417923 928 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AL031667.2-201ENST00000423903 323 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AL645998.1-201ENST00000424552 345 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IGHV3OR16-10-201ENST00000425181 350 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RPL12P15-201ENST00000433385 499 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ACTBP11-201ENST00000436287 1126 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 CYCSP32-201ENST00000440548 321 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 TDGF1P1-201ENST00000445734 527 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AL353072.1-201ENST00000446021 442 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 OR7E62P-201ENST00000456741 477 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RPS27P20-201ENST00000492051 246 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC004980.4-201ENST00000513375 203 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 RNA5SP420-201ENST00000516997 137 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IGLV3-15-201ENST00000518356 244 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IGKV1-22-201ENST00000524313 326 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AP000620.1-201ENST00000527147 504 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC226150.1-201ENST00000544259 466 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 LINC01405-204ENST00000553177 524 ntTSL 4 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ACTG1P17-201ENST00000558391 1119 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 MIR3180-2-201ENST00000581748 88 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC026150.3-201ENST00000602595 499 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC244097.1-201ENST00000621631 1216 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 OR2I1P-208ENST00000641137 4948 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 PARD3B-202ENST00000351153 3411 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 SFPQP1-201ENST00000446621 1786 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 NADK-204ENST00000378625 3653 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ATP1A3-208ENST00000545399 3618 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 AC023830.3-201ENST00000612995 1455 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 FLT3-201ENST00000241453 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 PPP1R26P3-201ENST00000612861 3800 ntBASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 PPP1R1A-202ENST00000547431 2491 ntTSL 5 BASIC5.82□□□□□ -1.48
KRTAP3-2Q9BYR7 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms