RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 NISCHQ9Y2I1 1504 aa23.68■■□□□ 1.38
ATP1A3-208ENST00000545399 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
ATP1A3-208ENST00000545399 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
ATP1A3-208ENST00000545399 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
ATP1A3-208ENST00000545399 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
ATP1A3-208ENST00000545399 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
ATP1A3-208ENST00000545399 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
ATP1A3-208ENST00000545399 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
ATP1A3-208ENST00000545399 ABCC9O60706 1549 aa19.69■□□□□ 0.74
ATP1A3-208ENST00000545399 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
ATP1A3-208ENST00000545399 PCGF6Q9BYE7 350 aa19.64■□□□□ 0.73
ATP1A3-208ENST00000545399 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
ATP1A3-208ENST00000545399 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
ATP1A3-208ENST00000545399 TTBK1Q5TCY1 1321 aaPredicted RBP19.37■□□□□ 0.69
ATP1A3-208ENST00000545399 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
ATP1A3-208ENST00000545399 PPARGC1BQ86YN6 1023 aaKnown RBP19.35■□□□□ 0.69
ATP1A3-208ENST00000545399 SCRIBQ14160 1630 aa19.33■□□□□ 0.68
ATP1A3-208ENST00000545399 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
ATP1A3-208ENST00000545399 RANGAP1P46060 587 aaPredicted RBP19.08■□□□□ 0.64
ATP1A3-208ENST00000545399 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
ATP1A3-208ENST00000545399 HRCP23327 699 aa18.91■□□□□ 0.62
ATP1A3-208ENST00000545399 CECR2Q9BXF3 1484 aa18.9■□□□□ 0.62
ATP1A3-208ENST00000545399 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
ATP1A3-208ENST00000545399 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
ATP1A3-208ENST00000545399 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
ATP1A3-208ENST00000545399 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
ATP1A3-208ENST00000545399 MROH2BQ7Z745 1585 aa18.62■□□□□ 0.57
ATP1A3-208ENST00000545399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
ATP1A3-208ENST00000545399 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
ATP1A3-208ENST00000545399 NACADO15069 1562 aa18.51■□□□□ 0.55
ATP1A3-208ENST00000545399 WIZO95785 1651 aa18.47■□□□□ 0.55
ATP1A3-208ENST00000545399 APLP2Q06481 763 aa18.36■□□□□ 0.53
ATP1A3-208ENST00000545399 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
ATP1A3-208ENST00000545399 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
ATP1A3-208ENST00000545399 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
ATP1A3-208ENST00000545399 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
ATP1A3-208ENST00000545399 ITGAEP38570 1179 aa18.21■□□□□ 0.51
ATP1A3-208ENST00000545399 SOGA1O94964 1423 aa18.21■□□□□ 0.51
ATP1A3-208ENST00000545399 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
ATP1A3-208ENST00000545399 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
ATP1A3-208ENST00000545399 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
ATP1A3-208ENST00000545399 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
ATP1A3-208ENST00000545399 YTHDC1Q96MU7 727 aaKnown RBP18.04■□□□□ 0.48
ATP1A3-208ENST00000545399 P3H3Q8IVL6 736 aa18.02■□□□□ 0.48
ATP1A3-208ENST00000545399 SMARCA4P51532 1647 aa17.98■□□□□ 0.47
ATP1A3-208ENST00000545399 CEP162Q5TB80 1403 aa17.98■□□□□ 0.47
ATP1A3-208ENST00000545399 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
ATP1A3-208ENST00000545399 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
ATP1A3-208ENST00000545399 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
ATP1A3-208ENST00000545399 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
ATP1A3-208ENST00000545399 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
ATP1A3-208ENST00000545399 ARID3CA6NKF2 412 aa17.8■□□□□ 0.44
ATP1A3-208ENST00000545399 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
ATP1A3-208ENST00000545399 CLIP1P30622 1438 aa17.78■□□□□ 0.44
ATP1A3-208ENST00000545399 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
ATP1A3-208ENST00000545399 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
ATP1A3-208ENST00000545399 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
ATP1A3-208ENST00000545399 FAM50AQ14320 339 aaKnown RBP17.72■□□□□ 0.43
ATP1A3-208ENST00000545399 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
ATP1A3-208ENST00000545399 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
ATP1A3-208ENST00000545399 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
ATP1A3-208ENST00000545399 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
ATP1A3-208ENST00000545399 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
ATP1A3-208ENST00000545399 SYNJ1O43426 1573 aa17.58■□□□□ 0.4
ATP1A3-208ENST00000545399 EEA1Q15075 1411 aa17.57■□□□□ 0.4
ATP1A3-208ENST00000545399 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
ATP1A3-208ENST00000545399 ZNF316A6NFI3 1004 aaPredicted RBP17.53■□□□□ 0.4
ATP1A3-208ENST00000545399 CENPBP07199 599 aaPredicted RBP17.52■□□□□ 0.4
ATP1A3-208ENST00000545399 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
ATP1A3-208ENST00000545399 FBLN2P98095 1184 aa17.48■□□□□ 0.39
ATP1A3-208ENST00000545399 CUX2O14529 1486 aa17.47■□□□□ 0.39
ATP1A3-208ENST00000545399 HIRIP3Q9BW71 556 aaPredicted RBP17.47■□□□□ 0.39
ATP1A3-208ENST00000545399 KIF27Q86VH2 1401 aa17.46■□□□□ 0.39
ATP1A3-208ENST00000545399 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
ATP1A3-208ENST00000545399 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
ATP1A3-208ENST00000545399 EIF4G1Q04637 1599 aaKnown RBP17.43■□□□□ 0.38
ATP1A3-208ENST00000545399 MIER1Q8N108 512 aa17.43■□□□□ 0.38
ATP1A3-208ENST00000545399 VPS8Q8N3P4 1428 aa17.41■□□□□ 0.38
ATP1A3-208ENST00000545399 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
ATP1A3-208ENST00000545399 TDRD9Q8NDG6 1382 aaKnown RBP17.35■□□□□ 0.37
ATP1A3-208ENST00000545399 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
ATP1A3-208ENST00000545399 ACIN1Q9UKV3 1341 aaKnown RBP17.34■□□□□ 0.37
ATP1A3-208ENST00000545399 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
ATP1A3-208ENST00000545399 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
ATP1A3-208ENST00000545399 NESP48681 1621 aa17.3■□□□□ 0.36
ATP1A3-208ENST00000545399 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
ATP1A3-208ENST00000545399 TRIM52Q96A61 297 aa17.28■□□□□ 0.36
ATP1A3-208ENST00000545399 RAD54L2Q9Y4B4 1467 aa17.27■□□□□ 0.36
ATP1A3-208ENST00000545399 CUX1P39880 1505 aa17.26■□□□□ 0.35
ATP1A3-208ENST00000545399 KIF21BO75037 1637 aa17.23■□□□□ 0.35
ATP1A3-208ENST00000545399 POLR3GLQ9BT43 218 aa17.23■□□□□ 0.35
ATP1A3-208ENST00000545399 IGF1RP08069 1367 aa17.22■□□□□ 0.35
ATP1A3-208ENST00000545399 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
ATP1A3-208ENST00000545399 RRP7BPQ9NSQ0 103 aa17.2■□□□□ 0.34
ATP1A3-208ENST00000545399 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
ATP1A3-208ENST00000545399 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
ATP1A3-208ENST00000545399 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
ATP1A3-208ENST00000545399 ZNF777Q9ULD5 760 aaPredicted RBP17.19■□□□□ 0.34
ATP1A3-208ENST00000545399 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
ATP1A3-208ENST00000545399 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms