Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR13K1P-201ENST00000444577 975 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 NDUFA5P5-201ENST00000468361 342 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC027243.2-201ENST00000602530 724 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AL683813.2-201ENST00000605245 502 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 MIR6778-201ENST00000617912 73 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 AC004836.1-201ENST00000623032 634 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 FO681491.1-202ENST00000623392 737 ntBASIC9.65□□□□□ -0.87
VPS8Q8N3P4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 SALL4P7-201ENST00000555779 3120 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 PSG10P-201ENST00000501199 1500 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 RNA5SP500-201ENST00000364486 119 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 RPL35AP3-201ENST00000414680 288 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AC002069.1-201ENST00000429649 1159 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AC016027.4-201ENST00000450866 277 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 CFL1P4-201ENST00000451536 498 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AL359839.1-201ENST00000451975 1160 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 GEMIN2P1-201ENST00000454246 752 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AC112187.1-201ENST00000455837 479 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AC023818.1-201ENST00000498379 384 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AL645933.2-201ENST00000606743 1207 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AC108673.3-201ENST00000609183 335 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AL365181.4-201ENST00000609800 547 ntBASIC9.64□□□□□ -0.87
VPS8Q8N3P4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC9.64□□□□□ -0.87
VPS8Q8N3P4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AL359091.1-201ENST00000449048 1734 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 SHQ1P1-201ENST00000437111 1544 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 RPS10P18-201ENST00000442662 495 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 HLA-DPA3-207ENST00000454398 229 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AC023194.2-201ENST00000465398 406 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 RPL12P24-201ENST00000474907 486 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AC068305.2-201ENST00000550567 1205 ntBASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
VPS8Q8N3P4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 SMN2-214ENST00000626847 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 CASC19-238ENST00000641523 1558 ntBASIC9.62□□□□□ -0.87
VPS8Q8N3P4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AC007568.1-201ENST00000422912 471 ntBASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AL022319.1-201ENST00000458183 1167 ntBASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 NANOGNBP2-201ENST00000544753 553 ntBASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 AC096861.1-201ENST00000616652 240 ntBASIC9.62□□□□□ -0.87
VPS8Q8N3P4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS8Q8N3P4 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 RNFT1P3-201ENST00000340898 1052 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC004386.1-201ENST00000393214 761 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 LYPLA1P3-201ENST00000402650 695 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 TMA16P2-201ENST00000413187 601 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC079807.1-201ENST00000429993 481 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC110602.1-201ENST00000437414 318 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 TRIM60P16-201ENST00000444048 694 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AL445466.1-201ENST00000448432 357 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC005077.1-201ENST00000449226 375 ntBASIC9.61□□□□□ -0.87
VPS8Q8N3P4 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS8Q8N3P4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms