Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC003985.2-201ENST00000562268 1669 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ATP5BP1-201ENST00000411980 1574 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 Z93929.1-201ENST00000418200 1475 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 MTCO1P4-201ENST00000520516 1409 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RNU6-792P-201ENST00000363490 107 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 SNORA72.3-201ENST00000365074 132 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL590762.1-201ENST00000391782 432 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL133260.1-201ENST00000405720 405 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL138899.2-201ENST00000439139 499 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 OR51P1P-201ENST00000447547 942 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL121578.2-201ENST00000448797 447 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC010878.1-201ENST00000456500 1047 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC018635.1-201ENST00000468292 1030 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RPL29P23-201ENST00000486188 442 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC021087.2-201ENST00000504656 1203 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 IGLVV-66-201ENST00000523818 341 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC093014.1-201ENST00000548926 724 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 MIR3135A-201ENST00000578460 77 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 MTCO3P22-201ENST00000603219 784 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC025262.3-201ENST00000623666 360 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 AC027559.1-201ENST00000636288 271 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 OR5AC4P-202ENST00000642086 985 ntBASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CCDC144BQ3MJ40 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CCDC144BQ3MJ40 AC105114.1-201ENST00000624795 1862 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 OFD1P17-201ENST00000437639 3018 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC104837.1-201ENST00000444644 1587 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 TCP1P3-201ENST00000414406 1498 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC010894.1-201ENST00000313760 361 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 RNA5SP308-201ENST00000362532 115 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 RN7SKP250-201ENST00000363924 321 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 RN7SKP187-201ENST00000365536 330 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 ATP5F1P6-201ENST00000402768 767 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 NACAP7-201ENST00000407371 609 ntBASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.89□□□□□ -1.15
CCDC144BQ3MJ40 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms