Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL11A1P12107 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.01□□□□□ -1.29
COL11A1P12107 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.01□□□□□ -1.29
COL11A1P12107 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.01□□□□□ -1.29
COL11A1P12107 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL11A1P12107 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL11A1P12107 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
COL11A1P12107 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
COL11A1P12107 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.01□□□□□ -1.29
COL11A1P12107 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL11A1P12107 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
COL11A1P12107 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
COL11A1P12107 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7□□□□□ -1.29
COL11A1P12107 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7□□□□□ -1.29
COL11A1P12107 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 RN7SKP81-201ENST00000365603 331 ntBASIC7□□□□□ -1.29
COL11A1P12107 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7□□□□□ -1.29
COL11A1P12107 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7□□□□□ -1.29
COL11A1P12107 BX323845.3-201ENST00000428215 527 ntBASIC7□□□□□ -1.29
COL11A1P12107 TRIM60P16-201ENST00000444048 694 ntBASIC7□□□□□ -1.29
COL11A1P12107 AL161636.2-201ENST00000445179 927 ntBASIC7□□□□□ -1.29
COL11A1P12107 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 SNX18P26-201ENST00000458433 740 ntBASIC7□□□□□ -1.29
COL11A1P12107 ACA64.1-201ENST00000459171 127 ntBASIC7□□□□□ -1.29
COL11A1P12107 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7□□□□□ -1.29
COL11A1P12107 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7□□□□□ -1.29
COL11A1P12107 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7□□□□□ -1.29
COL11A1P12107 AP005639.1-201ENST00000526939 192 ntBASIC7□□□□□ -1.29
COL11A1P12107 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC7□□□□□ -1.29
COL11A1P12107 MIR6793-201ENST00000612376 63 ntBASIC7□□□□□ -1.29
COL11A1P12107 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7□□□□□ -1.29
COL11A1P12107 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
COL11A1P12107 AC011815.2-201ENST00000618230 2021 ntBASIC7□□□□□ -1.29
COL11A1P12107 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7□□□□□ -1.29
COL11A1P12107 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL11A1P12107 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL11A1P12107 AL359976.1-201ENST00000418655 3528 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.99□□□□□ -1.29
COL11A1P12107 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 RN7SKP77-201ENST00000363261 353 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.99□□□□□ -1.29
COL11A1P12107 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 RNA5SP440-201ENST00000612665 119 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 AC022726.2-201ENST00000634673 547 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 Z93929.1-201ENST00000418200 1475 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 RNF19BPY-201ENST00000458209 1550 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL11A1P12107 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 AP000866.6-201ENST00000638898 3579 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.99□□□□□ -1.29
COL11A1P12107 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
COL11A1P12107 U3.25-201ENST00000391209 220 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.99□□□□□ -1.29
COL11A1P12107 RN7SL717P-201ENST00000478343 297 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 KCTD9P4-201ENST00000526766 1166 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.99□□□□□ -1.29
COL11A1P12107 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.99□□□□□ -1.29
COL11A1P12107 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.99□□□□□ -1.29
COL11A1P12107 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.99□□□□□ -1.29
COL11A1P12107 AL352984.2-201ENST00000611153 546 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 AL445647.2-201ENST00000615170 130 ntBASIC6.99□□□□□ -1.29
COL11A1P12107 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL11A1P12107 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL11A1P12107 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 AC105235.1-201ENST00000623208 1816 ntBASIC6.98□□□□□ -1.29
COL11A1P12107 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC6.98□□□□□ -1.29
COL11A1P12107 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.98□□□□□ -1.29
COL11A1P12107 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC6.98□□□□□ -1.29
COL11A1P12107 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
COL11A1P12107 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms