Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC105046.1-201ENST00000566457 4997 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 MTND4P5-201ENST00000435821 1374 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL356361.1-201ENST00000400943 1459 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL022163.1-201ENST00000430261 1569 ntBASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.43□□□□□ -1.06
TMEM88BA6NKF7 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RNU4-31P-201ENST00000384211 141 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 XIST-201ENST00000416330 750 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AL365203.2-201ENST00000423444 196 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 BRWD1P3-201ENST00000428816 390 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RPL7AP71-201ENST00000451120 739 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 HMGB1P5-202ENST00000451497 985 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RPSAP7-201ENST00000456871 885 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 SETP20-201ENST00000457046 852 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PPP1R2P6-201ENST00000478565 588 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RN7SL362P-201ENST00000494228 267 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AP001804.2-201ENST00000533932 910 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC092865.1-201ENST00000544395 1023 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC008015.1-201ENST00000555505 465 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC105129.3-201ENST00000605455 485 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC097381.3-201ENST00000608962 462 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC007671.2-201ENST00000637344 619 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 AC005261.4-201ENST00000600047 1385 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 MTCO1P28-201ENST00000574177 1528 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ICE2P1-201ENST00000512800 1849 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 NF1P2-201ENST00000556855 2505 ntBASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ZNF92-202ENST00000357512 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TMEM88BA6NKF7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 MALAT1-202ENST00000534336 8708 ntBASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 AL391666.1-201ENST00000442570 2764 ntBASIC8.41□□□□□ -1.06
TMEM88BA6NKF7 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms