Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD3-BMI1R4GMX3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 AL031432.3-201ENST00000607698 485 ntBASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC138932.1-201ENST00000534164 6830 ntBASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC009113.1-201ENST00000570267 2443 ntBASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 LINC01465-201ENST00000408887 1940 ntBASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
COMMD3-BMI1R4GMX3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC104581.1-202ENST00000635932 2618 ntBASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC139713.2-201ENST00000641328 2723 ntBASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COMMD3-BMI1R4GMX3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.52■□□□□ 0.56
COMMD3-BMI1R4GMX3 AL136967.2-201ENST00000623968 743 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms