Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 AC073648.6-201ENST00000641589 218 ntBASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.05■□□□□ 0.8
RAI2Q9Y5P3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 AC073130.3-201ENST00000624389 2278 ntBASIC20.04■□□□□ 0.8
RAI2Q9Y5P3 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 PHGDH-210ENST00000641115 1638 ntBASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 KRT17P3-201ENST00000420566 1262 ntBASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAI2Q9Y5P3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAI2Q9Y5P3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.02■□□□□ 0.79
RAI2Q9Y5P3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.02■□□□□ 0.79
RAI2Q9Y5P3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.02■□□□□ 0.79
RAI2Q9Y5P3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RAI2Q9Y5P3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.02■□□□□ 0.79
RAI2Q9Y5P3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 AC211429.1-201ENST00000415277 523 ntBASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAI2Q9Y5P3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RAI2Q9Y5P3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAI2Q9Y5P3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAI2Q9Y5P3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAI2Q9Y5P3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
RAI2Q9Y5P3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAI2Q9Y5P3 AC018553.1-201ENST00000616682 1458 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms