Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHB7Q9Y5E2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 AC026271.3-201ENST00000571884 352 ntBASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHB7Q9Y5E2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 KRT18P57-201ENST00000443599 1254 ntBASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 KRT18P16-201ENST00000510337 1294 ntBASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 AC131212.4-201ENST00000623606 975 ntBASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB7Q9Y5E2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 TERF1P1-201ENST00000311003 1181 ntBASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 MESTP1-201ENST00000404287 994 ntBASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 SLC25A3P1-201ENST00000443844 931 ntBASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB7Q9Y5E2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB7Q9Y5E2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 B3GAT3P1-201ENST00000471720 806 ntBASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 C2orf69P3-201ENST00000565542 1120 ntBASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.33■■□□□ 1.01
PCDHB7Q9Y5E2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms