Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VPS9D1Q9Y2B5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VPS9D1Q9Y2B5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 HLA-B-256ENST00000639848 1089 ntBASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VPS9D1Q9Y2B5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 AL138781.1-201ENST00000566567 1274 ntBASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 AL109923.1-201ENST00000618799 583 ntBASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 MYC-209ENST00000641252 345 ntBASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VPS9D1Q9Y2B5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms