Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH9Q9ULB4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH9Q9ULB4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.96■□□□□ 0.95
CDH9Q9ULB4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDH9Q9ULB4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
CDH9Q9ULB4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDH9Q9ULB4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 AP001271.2-201ENST00000624018 1556 ntBASIC20.95■□□□□ 0.94
CDH9Q9ULB4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 YBX1P10-201ENST00000444752 975 ntBASIC20.95■□□□□ 0.94
CDH9Q9ULB4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 HTR7P1-201ENST00000538670 1336 ntBASIC20.95■□□□□ 0.94
CDH9Q9ULB4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDH9Q9ULB4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 AL157384.1-201ENST00000445995 2473 ntBASIC20.94■□□□□ 0.94
CDH9Q9ULB4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 AP001412.1-201ENST00000608405 714 ntBASIC20.94■□□□□ 0.94
CDH9Q9ULB4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDH9Q9ULB4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 AL596275.1-201ENST00000423464 877 ntBASIC20.93■□□□□ 0.94
CDH9Q9ULB4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.93■□□□□ 0.94
CDH9Q9ULB4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AL691432.2-201ENST00000607222 2038 ntBASIC20.92■□□□□ 0.94
CDH9Q9ULB4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AL353807.1-201ENST00000427475 662 ntBASIC20.92■□□□□ 0.94
CDH9Q9ULB4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH9Q9ULB4 AC099778.1-201ENST00000568593 1911 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms