Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 TSPY6P-201ENST00000448518 926 ntBASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 AC008694.1-202ENST00000636953 945 ntBASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT11Q9UKZ1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 AL138781.2-201ENST00000617896 1843 ntBASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 AC093787.1-201ENST00000450396 207 ntBASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 RARRES2P4-201ENST00000514074 484 ntBASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNOT11Q9UKZ1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 AL512625.2-201ENST00000417533 625 ntBASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CNOT11Q9UKZ1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 FAM21FP-204ENST00000608637 956 ntBASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.96■□□□□ 0.63
CNOT11Q9UKZ1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 AL355802.2-201ENST00000402069 882 ntBASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNOT11Q9UKZ1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms