Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCDNQ9UBB6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NCDNQ9UBB6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NCDNQ9UBB6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.69■□□□□ 0.74
NCDNQ9UBB6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 SLC25A1P4-201ENST00000567977 778 ntBASIC19.69■□□□□ 0.74
NCDNQ9UBB6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NCDNQ9UBB6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.68■□□□□ 0.74
NCDNQ9UBB6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 AC069148.1-201ENST00000608741 768 ntBASIC19.68■□□□□ 0.74
NCDNQ9UBB6 AC116562.4-202ENST00000641738 218 ntBASIC19.68■□□□□ 0.74
NCDNQ9UBB6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCDNQ9UBB6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 AL138966.2-201ENST00000621997 464 ntBASIC19.67■□□□□ 0.74
NCDNQ9UBB6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCDNQ9UBB6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.66■□□□□ 0.74
NCDNQ9UBB6 AL445675.2-201ENST00000620291 557 ntBASIC19.66■□□□□ 0.74
NCDNQ9UBB6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 FAM99A-202ENST00000538190 1989 ntBASIC19.66■□□□□ 0.74
NCDNQ9UBB6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCDNQ9UBB6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 AC080038.3-201ENST00000623346 1952 ntBASIC19.65■□□□□ 0.74
NCDNQ9UBB6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NCDNQ9UBB6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms