Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRFN1Q9P244 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.19■□□□□ 0.5
LRFN1Q9P244 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.18■□□□□ 0.5
LRFN1Q9P244 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 AC073912.3-201ENST00000624414 853 ntBASIC18.18■□□□□ 0.5
LRFN1Q9P244 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRFN1Q9P244 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.18■□□□□ 0.5
LRFN1Q9P244 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 SMG8-203ENST00000578922 2178 ntBASIC18.17■□□□□ 0.5
LRFN1Q9P244 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.17■□□□□ 0.5
LRFN1Q9P244 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRFN1Q9P244 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRFN1Q9P244 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRFN1Q9P244 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRFN1Q9P244 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 AP006587.1-201ENST00000534129 1502 ntBASIC18.15■□□□□ 0.5
LRFN1Q9P244 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 AP002982.1-201ENST00000492365 877 ntBASIC18.15■□□□□ 0.5
LRFN1Q9P244 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 REXO1L12P-201ENST00000622156 912 ntBASIC18.15■□□□□ 0.5
LRFN1Q9P244 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRFN1Q9P244 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRFN1Q9P244 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LRFN1Q9P244 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN1Q9P244 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN1Q9P244 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
LRFN1Q9P244 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN1Q9P244 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRFN1Q9P244 AC116351.2-201ENST00000606540 1585 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms