Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 MIR572-201ENST00000384983 95 ntBASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 RARRES2P11-201ENST00000635158 484 ntBASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 LETM1P2-201ENST00000597330 2178 ntBASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SND1-IT1Q9HBX3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SND1-IT1Q9HBX3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AL691432.2-201ENST00000607222 2038 ntBASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SND1-IT1Q9HBX3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms