Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PIF1Q9H611 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PIF1Q9H611 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.87■□□□□ 0.61
PIF1Q9H611 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.87■□□□□ 0.61
PIF1Q9H611 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PIF1Q9H611 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.87■□□□□ 0.61
PIF1Q9H611 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PIF1Q9H611 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PIF1Q9H611 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.86■□□□□ 0.61
PIF1Q9H611 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PIF1Q9H611 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.86■□□□□ 0.61
PIF1Q9H611 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PIF1Q9H611 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.86■□□□□ 0.61
PIF1Q9H611 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.86■□□□□ 0.61
PIF1Q9H611 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PIF1Q9H611 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PIF1Q9H611 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PIF1Q9H611 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PIF1Q9H611 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
PIF1Q9H611 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PIF1Q9H611 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
PIF1Q9H611 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PIF1Q9H611 CDV3P1-201ENST00000471403 739 ntBASIC18.85■□□□□ 0.61
PIF1Q9H611 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.85■□□□□ 0.61
PIF1Q9H611 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.85■□□□□ 0.61
PIF1Q9H611 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PIF1Q9H611 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.85■□□□□ 0.61
PIF1Q9H611 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PIF1Q9H611 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PIF1Q9H611 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PIF1Q9H611 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PIF1Q9H611 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.84■□□□□ 0.61
PIF1Q9H611 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.84■□□□□ 0.61
PIF1Q9H611 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PIF1Q9H611 MIR5787-201ENST00000611784 55 ntBASIC18.84■□□□□ 0.61
PIF1Q9H611 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.84■□□□□ 0.61
PIF1Q9H611 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.84■□□□□ 0.61
PIF1Q9H611 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PIF1Q9H611 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PIF1Q9H611 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PIF1Q9H611 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PIF1Q9H611 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.84■□□□□ 0.61
PIF1Q9H611 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PIF1Q9H611 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.83■□□□□ 0.61
PIF1Q9H611 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIF1Q9H611 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.83■□□□□ 0.61
PIF1Q9H611 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIF1Q9H611 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PIF1Q9H611 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PIF1Q9H611 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PIF1Q9H611 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PIF1Q9H611 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms