Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.61■□□□□ 0.89
DDX47Q9H0S4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 NEFHP1-201ENST00000412845 2629 ntBASIC20.61■□□□□ 0.89
DDX47Q9H0S4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
DDX47Q9H0S4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 KRT19P1-201ENST00000405746 1186 ntBASIC20.6■□□□□ 0.89
DDX47Q9H0S4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
DDX47Q9H0S4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 AL591742.1-201ENST00000604433 565 ntBASIC20.59■□□□□ 0.89
DDX47Q9H0S4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
DDX47Q9H0S4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DDX47Q9H0S4 AC016405.3-201ENST00000607710 860 ntBASIC20.58■□□□□ 0.89
DDX47Q9H0S4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX47Q9H0S4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 KRT16P6-202ENST00000425692 1426 ntBASIC20.57■□□□□ 0.88
DDX47Q9H0S4 TERF1P5-201ENST00000477545 1207 ntBASIC20.57■□□□□ 0.88
DDX47Q9H0S4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 AL031963.3-201ENST00000606441 850 ntBASIC20.57■□□□□ 0.88
DDX47Q9H0S4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX47Q9H0S4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms