Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC007749.1-201ENST00000564299 585 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC079148.1-201ENST00000565944 819 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC02184-201ENST00000568121 552 ntTSL 2 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 OR4C3-202ENST00000611380 597 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC091304.6-201ENST00000619761 202 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC092803.2-201ENST00000564287 1899 ntBASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-3Q9BYR6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC026765.2-201ENST00000551875 1330 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 DPM1-201ENST00000371582 1161 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 MTCYBP1-201ENST00000454315 1119 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 C1DP5-201ENST00000525775 383 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 MTCO3P13-201ENST00000577757 781 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC005559.1-201ENST00000589661 871 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AP001836.1-201ENST00000604675 523 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 Z98200.1-201ENST00000607298 470 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AL031673.1-201ENST00000611460 466 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC073530.2-201ENST00000623987 261 ntBASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-3Q9BYR6 AC243964.3-201ENST00000623022 2028 ntBASIC12.21□□□□□ -0.46
KRTAP3-3Q9BYR6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KRTAP3-3Q9BYR6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC12.21□□□□□ -0.46
KRTAP3-3Q9BYR6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KRTAP3-3Q9BYR6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
KRTAP3-3Q9BYR6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 TNMD-201ENST00000373031 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 Y_RNA.11-201ENST00000362375 109 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 RNU6-1011P-201ENST00000384668 107 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 ATP5F1P2-201ENST00000398143 760 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 FAM104B-203ENST00000425133 1229 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 MTCO2P23-201ENST00000425216 680 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 MTND1P14-201ENST00000427400 950 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC073551.1-201ENST00000450741 834 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC108673.1-201ENST00000510422 1159 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC005609.5-202ENST00000624176 513 ntTSL 4 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AC087269.2-201ENST00000641764 975 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 AP004609.3-201ENST00000610705 1884 ntBASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 DHFR-202ENST00000504396 1447 ntTSL 2 BASIC12.2□□□□□ -0.46
KRTAP3-3Q9BYR6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
KRTAP3-3Q9BYR6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms