Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 BX088651.1-201ENST00000540551 451 ntBASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 REXO1L12P-201ENST00000622156 912 ntBASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRAIPQ9BWF2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TRAIPQ9BWF2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.7■■□□□ 1.07
TRAIPQ9BWF2 FEM1AP1-201ENST00000431297 1995 ntBASIC21.7■■□□□ 1.07
TRAIPQ9BWF2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAIPQ9BWF2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 AL353708.3-201ENST00000610272 989 ntBASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 HTR7P1-201ENST00000538670 1336 ntBASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.69■■□□□ 1.06
TRAIPQ9BWF2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 AC004264.1-201ENST00000608354 794 ntBASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRAIPQ9BWF2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAIPQ9BWF2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms