Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.82■□□□□ 0.92
SMOQ99835 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.82■□□□□ 0.92
SMOQ99835 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 AC112907.3-201ENST00000577781 2400 ntBASIC20.82■□□□□ 0.92
SMOQ99835 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.82■□□□□ 0.92
SMOQ99835 Z99916.2-201ENST00000604037 246 ntBASIC20.82■□□□□ 0.92
SMOQ99835 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.82■□□□□ 0.92
SMOQ99835 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SMOQ99835 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.82■□□□□ 0.92
SMOQ99835 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
SMOQ99835 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.82■□□□□ 0.92
SMOQ99835 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMOQ99835 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.81■□□□□ 0.92
SMOQ99835 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.81■□□□□ 0.92
SMOQ99835 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 TCF3P1-201ENST00000423021 1937 ntBASIC20.81■□□□□ 0.92
SMOQ99835 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SMOQ99835 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMOQ99835 KRT16P5-201ENST00000455284 522 ntBASIC20.81■□□□□ 0.92
SMOQ99835 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.81■□□□□ 0.92
SMOQ99835 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.81■□□□□ 0.92
SMOQ99835 AP006587.1-201ENST00000534129 1502 ntBASIC20.81■□□□□ 0.92
SMOQ99835 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMOQ99835 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMOQ99835 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SMOQ99835 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.8■□□□□ 0.92
SMOQ99835 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SMOQ99835 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.8■□□□□ 0.92
SMOQ99835 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.8■□□□□ 0.92
SMOQ99835 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SMOQ99835 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMOQ99835 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMOQ99835 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.79■□□□□ 0.92
SMOQ99835 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.79■□□□□ 0.92
SMOQ99835 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.79■□□□□ 0.92
SMOQ99835 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.79■□□□□ 0.92
SMOQ99835 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMOQ99835 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.79■□□□□ 0.92
SMOQ99835 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.79■□□□□ 0.92
SMOQ99835 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMOQ99835 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SMOQ99835 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.79■□□□□ 0.92
SMOQ99835 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMOQ99835 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
SMOQ99835 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SMOQ99835 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
SMOQ99835 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 AP001271.2-201ENST00000624018 1556 ntBASIC20.78■□□□□ 0.92
SMOQ99835 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SMOQ99835 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMOQ99835 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.78■□□□□ 0.92
SMOQ99835 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms