Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LINC01465-201ENST00000408887 1940 ntBASIC17.95■□□□□ 0.46
SPENQ96T58 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.95■□□□□ 0.46
SPENQ96T58 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.95■□□□□ 0.46
SPENQ96T58 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPENQ96T58 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SPENQ96T58 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
SPENQ96T58 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.95■□□□□ 0.46
SPENQ96T58 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SPENQ96T58 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SPENQ96T58 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SPENQ96T58 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 AC096733.2-201ENST00000609937 1394 ntBASIC17.94■□□□□ 0.46
SPENQ96T58 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPENQ96T58 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.94■□□□□ 0.46
SPENQ96T58 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 BX664615.1-201ENST00000443558 458 ntBASIC17.94■□□□□ 0.46
SPENQ96T58 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.94■□□□□ 0.46
SPENQ96T58 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPENQ96T58 AC005332.1-201ENST00000577698 1310 ntBASIC17.93■□□□□ 0.46
SPENQ96T58 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SPENQ96T58 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
SPENQ96T58 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SPENQ96T58 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SPENQ96T58 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SPENQ96T58 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPENQ96T58 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SPENQ96T58 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SPENQ96T58 AK4P3-201ENST00000418260 669 ntBASIC17.93■□□□□ 0.46
SPENQ96T58 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.93■□□□□ 0.46
SPENQ96T58 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SPENQ96T58 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.93■□□□□ 0.46
SPENQ96T58 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.93■□□□□ 0.46
SPENQ96T58 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPENQ96T58 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SPENQ96T58 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
SPENQ96T58 FEM1AP4-201ENST00000443167 1987 ntBASIC17.92■□□□□ 0.46
SPENQ96T58 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.92■□□□□ 0.46
SPENQ96T58 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SPENQ96T58 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.92■□□□□ 0.46
SPENQ96T58 AL359075.1-203ENST00000462729 1002 ntBASIC17.92■□□□□ 0.46
SPENQ96T58 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.92■□□□□ 0.46
SPENQ96T58 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.92■□□□□ 0.46
SPENQ96T58 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.92■□□□□ 0.46
SPENQ96T58 SLC25A1P4-201ENST00000567977 778 ntBASIC17.92■□□□□ 0.46
SPENQ96T58 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SPENQ96T58 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.92■□□□□ 0.46
SPENQ96T58 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.91■□□□□ 0.46
SPENQ96T58 FSCN1P1-201ENST00000568912 1481 ntBASIC17.91■□□□□ 0.46
SPENQ96T58 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.91■□□□□ 0.46
SPENQ96T58 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
SPENQ96T58 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 YBX1P2-201ENST00000489612 999 ntBASIC17.91■□□□□ 0.46
SPENQ96T58 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.91■□□□□ 0.46
SPENQ96T58 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SPENQ96T58 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SPENQ96T58 AL138966.2-201ENST00000621997 464 ntBASIC17.91■□□□□ 0.46
SPENQ96T58 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms