Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 AC018553.1-201ENST00000616682 1458 ntBASIC20.42■□□□□ 0.86
RPRD1AQ96P16 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPRD1AQ96P16 AIRN-201ENST00000601203 4374 ntBASIC20.41■□□□□ 0.86
RPRD1AQ96P16 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 AC124016.1-201ENST00000609552 612 ntBASIC20.41■□□□□ 0.86
RPRD1AQ96P16 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 AL691432.2-201ENST00000607222 2038 ntBASIC20.41■□□□□ 0.86
RPRD1AQ96P16 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPRD1AQ96P16 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.4■□□□□ 0.86
RPRD1AQ96P16 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.39■□□□□ 0.86
RPRD1AQ96P16 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.39■□□□□ 0.85
RPRD1AQ96P16 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
RPRD1AQ96P16 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.38■□□□□ 0.85
RPRD1AQ96P16 AC133681.1-201ENST00000465482 601 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms