Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
NECTIN4Q96NY8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 FAM207BP-201ENST00000447172 505 ntBASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 KRT126P-201ENST00000549467 1181 ntBASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 AC244015.2-201ENST00000616358 1861 ntBASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NECTIN4Q96NY8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 TSPY5P-201ENST00000426936 936 ntBASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 COX11P1-201ENST00000489116 835 ntBASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 AC010653.2-201ENST00000623505 997 ntBASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NECTIN4Q96NY8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 AC009947.2-201ENST00000444014 672 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 YBX1P2-201ENST00000489612 999 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 AC011298.2-201ENST00000617989 482 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 TFP1-202ENST00000475455 1573 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 RCC2P6-201ENST00000526625 1557 ntBASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NECTIN4Q96NY8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 AC004951.3-201ENST00000418645 1148 ntBASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 AC096733.2-201ENST00000609937 1394 ntBASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NECTIN4Q96NY8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 MFAP1P1-201ENST00000442257 1255 ntBASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 AL512604.3-201ENST00000569583 964 ntBASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 AL121956.5-201ENST00000625261 221 ntBASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.52■□□□□ 0.88
NECTIN4Q96NY8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms