Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 AL049812.1-201ENST00000432563 2267 ntBASIC15.1■□□□□ 0.01
LINC00479Q96M42 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00479Q96M42 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LINC00479Q96M42 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.1■□□□□ 0.01
LINC00479Q96M42 AC104581.1-202ENST00000635932 2618 ntBASIC15.1■□□□□ 0.01
LINC00479Q96M42 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 AC091799.1-201ENST00000422823 811 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 AC007322.3-201ENST00000426526 701 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 AC010141.2-201ENST00000452426 721 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 PBX2P1-201ENST00000493219 1291 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 AP001330.3-201ENST00000520123 633 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 AC009237.14-201ENST00000609975 1594 ntBASIC15.09■□□□□ 0.01
LINC00479Q96M42 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00479Q96M42 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00479Q96M42 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LINC00479Q96M42 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00479Q96M42 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.08■□□□□ 0.01
LINC00479Q96M42 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00479Q96M42 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00479Q96M42 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.08■□□□□ 0.01
LINC00479Q96M42 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00479Q96M42 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.08■□□□□ 0.01
LINC00479Q96M42 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.08■□□□□ 0
LINC00479Q96M42 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LINC00479Q96M42 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.08■□□□□ 0
LINC00479Q96M42 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.08■□□□□ 0
LINC00479Q96M42 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC15.08■□□□□ 0
LINC00479Q96M42 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LINC00479Q96M42 FAM21FP-204ENST00000608637 956 ntBASIC15.08■□□□□ 0
LINC00479Q96M42 AL355001.2-201ENST00000620617 1191 ntBASIC15.08■□□□□ 0
LINC00479Q96M42 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.08■□□□□ 0
LINC00479Q96M42 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.08■□□□□ 0
LINC00479Q96M42 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.08■□□□□ 0
LINC00479Q96M42 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.08■□□□□ 0
LINC00479Q96M42 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 AL138781.2-201ENST00000617896 1843 ntBASIC15.08■□□□□ 0
LINC00479Q96M42 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00479Q96M42 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LINC00479Q96M42 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00479Q96M42 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LINC00479Q96M42 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.07■□□□□ 0
LINC00479Q96M42 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LINC00479Q96M42 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LINC00479Q96M42 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
LINC00479Q96M42 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00479Q96M42 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LINC00479Q96M42 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms