Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 LTB4R2-202ENST00000528054 3092 ntBASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 EEF1DP3-203ENST00000566025 782 ntBASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 AC104581.1-202ENST00000635932 2618 ntBASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 RASA4CP-201ENST00000424092 1398 ntBASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.9■□□□□ 0.78
CHMP6Q96FZ7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMP6Q96FZ7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHMP6Q96FZ7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AC091305.1-201ENST00000479476 895 ntBASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 RARRES2P11-201ENST00000635158 484 ntBASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AL390961.4-201ENST00000623958 2535 ntBASIC19.89■□□□□ 0.77
CHMP6Q96FZ7 AC009113.1-201ENST00000570267 2443 ntBASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 MIR939-201ENST00000401314 82 ntBASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 AC133561.4-201ENST00000566112 224 ntBASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 AC142381.2-201ENST00000566120 298 ntBASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP6Q96FZ7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHMP6Q96FZ7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP6Q96FZ7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms