Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SNRNP40Q96DI7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 AK4P3-201ENST00000418260 669 ntBASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 BX664615.1-201ENST00000443558 458 ntBASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 AL024507.2-201ENST00000606070 2574 ntBASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SNRNP40Q96DI7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 INGX-201ENST00000359239 846 ntBASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 AC004980.1-204ENST00000429707 299 ntBASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 AL121603.2-201ENST00000557373 2117 ntBASIC17.84■□□□□ 0.45
SNRNP40Q96DI7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SNRNP40Q96DI7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 FAM87A-204ENST00000613235 858 ntBASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 AC131212.4-201ENST00000623606 975 ntBASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNRNP40Q96DI7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 AC063952.2-201ENST00000498792 1227 ntBASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 AC022616.7-201ENST00000525383 220 ntBASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 LINC01238-205ENST00000567549 1107 ntBASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNRNP40Q96DI7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNRNP40Q96DI7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms