Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC44A1Q8WWI5 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.84■□□□□ 0.77
SLC44A1Q8WWI5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC44A1Q8WWI5 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SLC44A1Q8WWI5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SLC44A1Q8WWI5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC44A1Q8WWI5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 KRT18P68-201ENST00000392293 1000 ntBASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 MFSD11-216ENST00000590393 1141 ntBASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 PHGDH-210ENST00000641115 1638 ntBASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 LINC01465-201ENST00000408887 1940 ntBASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SLC44A1Q8WWI5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 HLA-G-202ENST00000376815 851 ntBASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 HLA-G-203ENST00000376818 1127 ntBASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 KRT18P11-201ENST00000435214 1283 ntBASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC44A1Q8WWI5 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC44A1Q8WWI5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms