Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD5Q8TDI0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 AC125437.2-201ENST00000625180 2167 ntBASIC20.1■□□□□ 0.81
CHD5Q8TDI0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 RN7SL471P-201ENST00000580476 299 ntBASIC20.1■□□□□ 0.81
CHD5Q8TDI0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD5Q8TDI0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 TMEM179-206ENST00000616017 1645 ntBASIC20.09■□□□□ 0.81
CHD5Q8TDI0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD5Q8TDI0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 UBE2SP1-201ENST00000450587 669 ntBASIC20.08■□□□□ 0.81
CHD5Q8TDI0 NUDT16P1-203ENST00000513809 620 ntBASIC20.08■□□□□ 0.81
CHD5Q8TDI0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.08■□□□□ 0.81
CHD5Q8TDI0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 RARRES2P10-201ENST00000564312 460 ntBASIC20.08■□□□□ 0.8
CHD5Q8TDI0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.08■□□□□ 0.8
CHD5Q8TDI0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.07■□□□□ 0.8
CHD5Q8TDI0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHD5Q8TDI0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms