Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.28■■□□□ 1
LMO3Q8TAP4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LMO3Q8TAP4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LMO3Q8TAP4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.27■■□□□ 1
LMO3Q8TAP4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LMO3Q8TAP4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LMO3Q8TAP4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.27■■□□□ 1
LMO3Q8TAP4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.27■■□□□ 1
LMO3Q8TAP4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.27■■□□□ 1
LMO3Q8TAP4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.27■□□□□ 0.99
LMO3Q8TAP4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LMO3Q8TAP4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 AC120498.8-201ENST00000614275 531 ntBASIC21.26■□□□□ 0.99
LMO3Q8TAP4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LMO3Q8TAP4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LMO3Q8TAP4 AC116562.4-201ENST00000641316 2276 ntBASIC21.25■□□□□ 0.99
LMO3Q8TAP4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.24■□□□□ 0.99
LMO3Q8TAP4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.24■□□□□ 0.99
LMO3Q8TAP4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 SOX15-203ENST00000570788 1093 ntBASIC21.23■□□□□ 0.99
LMO3Q8TAP4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LMO3Q8TAP4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.22■□□□□ 0.99
LMO3Q8TAP4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms