Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 AC004980.1-204ENST00000429707 299 ntBASIC15.45■□□□□ 0.06
LINC01006Q8NI28 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 AC011506.1-201ENST00000474329 610 ntBASIC15.45■□□□□ 0.06
LINC01006Q8NI28 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC01006Q8NI28 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 LIN28AP1-201ENST00000429574 405 ntBASIC15.44■□□□□ 0.06
LINC01006Q8NI28 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 AC097488.1-201ENST00000507834 756 ntBASIC15.44■□□□□ 0.06
LINC01006Q8NI28 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 EGLN1P1-201ENST00000531623 762 ntBASIC15.44■□□□□ 0.06
LINC01006Q8NI28 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.44■□□□□ 0.06
LINC01006Q8NI28 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 AC092720.2-201ENST00000602388 1665 ntBASIC15.44■□□□□ 0.06
LINC01006Q8NI28 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC01006Q8NI28 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 TSPY14P-201ENST00000303979 915 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 CRYGFP-201ENST00000418459 633 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 ATP5G1P1-201ENST00000448724 379 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 AC104076.2-201ENST00000448912 469 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 DUX4L26-201ENST00000489078 1255 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 AC010203.1-204ENST00000548782 407 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 PHGDH-210ENST00000641115 1638 ntBASIC15.43■□□□□ 0.06
LINC01006Q8NI28 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC01006Q8NI28 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC01006Q8NI28 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms