Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 AC116562.2-201ENST00000507042 360 ntBASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ZNF248Q8NDW4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 LIN28AP1-201ENST00000429574 405 ntBASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 KSR1P1-201ENST00000446298 240 ntBASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 AC104076.2-201ENST00000448912 469 ntBASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.92■□□□□ 0.62
ZNF248Q8NDW4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 CR392000.1-201ENST00000624770 1228 ntBASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF248Q8NDW4 AC124283.5-201ENST00000624661 1809 ntBASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ZNF248Q8NDW4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.89■□□□□ 0.62
ZNF248Q8NDW4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.89■□□□□ 0.61
ZNF248Q8NDW4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms