Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 MTDHP1-201ENST00000605323 784 ntBASIC21.07■□□□□ 0.96
TTC39CQ8N584 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39CQ8N584 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39CQ8N584 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 ITM2C-210ENST00000620962 501 ntBASIC21.06■□□□□ 0.96
TTC39CQ8N584 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39CQ8N584 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39CQ8N584 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 AP006587.1-201ENST00000534129 1502 ntBASIC21.05■□□□□ 0.96
TTC39CQ8N584 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 TSPY20P-201ENST00000450910 630 ntBASIC21.05■□□□□ 0.96
TTC39CQ8N584 AC128676.1-201ENST00000454392 318 ntBASIC21.05■□□□□ 0.96
TTC39CQ8N584 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 AC073648.6-201ENST00000641589 218 ntBASIC21.05■□□□□ 0.96
TTC39CQ8N584 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TTC39CQ8N584 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39CQ8N584 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 YBX1P10-201ENST00000444752 975 ntBASIC21.04■□□□□ 0.96
TTC39CQ8N584 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 RN7SL471P-201ENST00000580476 299 ntBASIC21.04■□□□□ 0.96
TTC39CQ8N584 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.04■□□□□ 0.96
TTC39CQ8N584 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TTC39CQ8N584 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TTC39CQ8N584 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TTC39CQ8N584 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
TTC39CQ8N584 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.03■□□□□ 0.96
TTC39CQ8N584 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TTC39CQ8N584 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.03■□□□□ 0.96
TTC39CQ8N584 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms