Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC073314.1-201ENST00000568729 2216 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC211429.1-201ENST00000415277 523 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 REXO1L12P-201ENST00000622156 912 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 PLK5-205ENST00000642079 1969 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 KRT17P2-201ENST00000300992 1314 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC007952.6-201ENST00000573168 2673 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 AC003957.1-201ENST00000625108 2673 ntBASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PHTF2Q8N3S3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 AP005212.1-201ENST00000581547 1997 ntBASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 ECEL1P3-201ENST00000427961 737 ntBASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.47■□□□□ 0.87
PHTF2Q8N3S3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PHTF2Q8N3S3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
PHTF2Q8N3S3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 KRT16P5-201ENST00000455284 522 ntBASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 MIR4785-201ENST00000585005 73 ntBASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.45■□□□□ 0.86
PHTF2Q8N3S3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHTF2Q8N3S3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms