Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUDCD3Q8IVD9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
NUDCD3Q8IVD9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUDCD3Q8IVD9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUDCD3Q8IVD9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.64■□□□□ 0.74
NUDCD3Q8IVD9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NUDCD3Q8IVD9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 TERF1P2-201ENST00000583350 1212 ntBASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUDCD3Q8IVD9 AC020763.4-201ENST00000623414 4170 ntBASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.63■□□□□ 0.73
NUDCD3Q8IVD9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.62■□□□□ 0.73
NUDCD3Q8IVD9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 KRT8P17-201ENST00000453110 1448 ntBASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUDCD3Q8IVD9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms