Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC71Q8IV32 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 LSM12P1-201ENST00000411836 588 ntBASIC18.52■□□□□ 0.56
CCDC71Q8IV32 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.52■□□□□ 0.56
CCDC71Q8IV32 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.52■□□□□ 0.55
CCDC71Q8IV32 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AL355472.2-201ENST00000422958 438 ntBASIC18.51■□□□□ 0.55
CCDC71Q8IV32 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AC098590.1-201ENST00000468126 897 ntBASIC18.51■□□□□ 0.55
CCDC71Q8IV32 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AC006058.3-201ENST00000606217 1069 ntBASIC18.51■□□□□ 0.55
CCDC71Q8IV32 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC71Q8IV32 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 AL691432.2-201ENST00000607222 2038 ntBASIC18.5■□□□□ 0.55
CCDC71Q8IV32 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC71Q8IV32 AC093484.2-201ENST00000580996 2166 ntBASIC18.49■□□□□ 0.55
CCDC71Q8IV32 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC71Q8IV32 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms