Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC49Q8IUZ0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.22■□□□□ 0.83
LRRC49Q8IUZ0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 RNA5SP413-201ENST00000516373 109 ntBASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRRC49Q8IUZ0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
LRRC49Q8IUZ0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 POM121L13P-201ENST00000422362 380 ntBASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRRC49Q8IUZ0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 AP003097.1-201ENST00000530657 1135 ntBASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LRRC49Q8IUZ0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 AC026366.1-201ENST00000488803 879 ntBASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.18■□□□□ 0.82
LRRC49Q8IUZ0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms