Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 CRYGFP-201ENST00000418459 633 ntBASIC21.3■■□□□ 1
NPAS4Q8IUM7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 LIN28AP1-201ENST00000429574 405 ntBASIC21.3■■□□□ 1
NPAS4Q8IUM7 AC104076.2-201ENST00000448912 469 ntBASIC21.3■■□□□ 1
NPAS4Q8IUM7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
NPAS4Q8IUM7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAS4Q8IUM7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 AC079834.2-201ENST00000609776 1949 ntBASIC21.29■■□□□ 1
NPAS4Q8IUM7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 AC092720.2-201ENST00000602388 1665 ntBASIC21.29■■□□□ 1
NPAS4Q8IUM7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 ATP5G1P1-201ENST00000448724 379 ntBASIC21.29■■□□□ 1
NPAS4Q8IUM7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 PHGDH-210ENST00000641115 1638 ntBASIC21.29■■□□□ 1
NPAS4Q8IUM7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NPAS4Q8IUM7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPAS4Q8IUM7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 ECEL1P2-202ENST00000465689 757 ntBASIC21.28■■□□□ 1
NPAS4Q8IUM7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.28■■□□□ 1
NPAS4Q8IUM7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NPAS4Q8IUM7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.27■■□□□ 1
NPAS4Q8IUM7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 AC128688.1-201ENST00000487626 519 ntBASIC21.27■■□□□ 1
NPAS4Q8IUM7 NTF6B-201ENST00000591913 560 ntBASIC21.27■■□□□ 1
NPAS4Q8IUM7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NPAS4Q8IUM7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.27■■□□□ 1
NPAS4Q8IUM7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NPAS4Q8IUM7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.27■□□□□ 0.99
NPAS4Q8IUM7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NPAS4Q8IUM7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 AP000692.2-201ENST00000608391 879 ntBASIC21.26■□□□□ 0.99
NPAS4Q8IUM7 AC130371.2-201ENST00000619443 611 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms