Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 EGLN1P1-201ENST00000531623 762 ntBASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AL138966.2-201ENST00000621997 464 ntBASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.29□□□□□ -0.44
VPS13BQ7Z7G8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 AL121956.5-201ENST00000625261 221 ntBASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 AL121906.2-201ENST00000621597 723 ntBASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 AL358472.4-201ENST00000633140 710 ntBASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 FSCN1P1-201ENST00000568912 1481 ntBASIC12.28□□□□□ -0.44
VPS13BQ7Z7G8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 RNF152P1-201ENST00000397754 604 ntBASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
VPS13BQ7Z7G8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 BID-212ENST00000614949 1988 ntTSL 5 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 CLEC4GP1-201ENST00000596555 870 ntBASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 AL671883.3-201ENST00000603274 991 ntBASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 MIR2861-201ENST00000636310 90 ntBASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 GPALPP1-207ENST00000611650 899 ntBASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
VPS13BQ7Z7G8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 LINC00565-201ENST00000562710 2331 ntBASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 KRT8P10-201ENST00000450021 1447 ntBASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 AC005332.1-201ENST00000577698 1310 ntBASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VPS13BQ7Z7G8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms