Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 MCRIP2P1-201ENST00000394346 511 ntBASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 KRT18P5-201ENST00000436075 1291 ntBASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 AC100791.3-201ENST00000617619 330 ntBASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MRPL55Q7Z7F7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 MFSD11-216ENST00000590393 1141 ntBASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 AC069236.1-201ENST00000604339 616 ntBASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 AC016405.3-201ENST00000607710 860 ntBASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 AC008694.1-202ENST00000636953 945 ntBASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MRPL55Q7Z7F7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 LBX2-AS1-202ENST00000603175 2083 ntBASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
MRPL55Q7Z7F7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 TMEM179-206ENST00000616017 1645 ntBASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MRPL55Q7Z7F7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms