Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 AC142381.4-202ENST00000563973 229 ntBASIC13.04□□□□□ -0.32
SCXQ7RTU7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.04□□□□□ -0.32
SCXQ7RTU7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SCXQ7RTU7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC092368.3-202ENST00000574180 1591 ntBASIC13.03□□□□□ -0.32
SCXQ7RTU7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC116050.2-201ENST00000612102 1779 ntBASIC13.03□□□□□ -0.32
SCXQ7RTU7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AC244015.2-201ENST00000616358 1861 ntBASIC13.03□□□□□ -0.32
SCXQ7RTU7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SCXQ7RTU7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SCXQ7RTU7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCXQ7RTU7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SCXQ7RTU7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SCXQ7RTU7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SCXQ7RTU7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.02□□□□□ -0.32
SCXQ7RTU7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 PNMA6B-201ENST00000538162 1200 ntBASIC13.02□□□□□ -0.33
SCXQ7RTU7 AC105020.6-201ENST00000621523 1217 ntBASIC13.02□□□□□ -0.33
SCXQ7RTU7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SCXQ7RTU7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.02□□□□□ -0.33
SCXQ7RTU7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms