Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC10.66□□□□□ -0.7
LCA10Q71F78 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 TSPY9P-201ENST00000440215 945 ntBASIC10.66□□□□□ -0.7
LCA10Q71F78 TSPY11P-201ENST00000442607 1045 ntBASIC10.66□□□□□ -0.7
LCA10Q71F78 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC10.66□□□□□ -0.7
LCA10Q71F78 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 CICP6-201ENST00000457191 2729 ntBASIC10.66□□□□□ -0.7
LCA10Q71F78 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.66□□□□□ -0.7
LCA10Q71F78 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 AC084018.2-201ENST00000613093 2607 ntBASIC10.66□□□□□ -0.7
LCA10Q71F78 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
LCA10Q71F78 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.66□□□□□ -0.7
LCA10Q71F78 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LCA10Q71F78 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
LCA10Q71F78 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.65□□□□□ -0.7
LCA10Q71F78 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.65□□□□□ -0.7
LCA10Q71F78 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LCA10Q71F78 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LCA10Q71F78 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC10.65□□□□□ -0.7
LCA10Q71F78 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 AL499627.2-201ENST00000606283 725 ntBASIC10.65□□□□□ -0.7
LCA10Q71F78 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
LCA10Q71F78 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
LCA10Q71F78 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LCA10Q71F78 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LCA10Q71F78 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC10.65□□□□□ -0.71
LCA10Q71F78 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
LCA10Q71F78 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LCA10Q71F78 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LCA10Q71F78 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.65□□□□□ -0.71
LCA10Q71F78 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.65□□□□□ -0.71
LCA10Q71F78 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
LCA10Q71F78 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LCA10Q71F78 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LCA10Q71F78 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.64□□□□□ -0.71
LCA10Q71F78 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 TPR-209ENST00000613151 2478 ntTSL 5 BASIC10.64□□□□□ -0.71
LCA10Q71F78 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LCA10Q71F78 AC239859.2-201ENST00000444165 318 ntBASIC10.64□□□□□ -0.71
LCA10Q71F78 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC10.64□□□□□ -0.71
LCA10Q71F78 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC10.64□□□□□ -0.71
LCA10Q71F78 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LCA10Q71F78 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC10.64□□□□□ -0.71
LCA10Q71F78 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms