Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LINC00575Q6W349 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00575Q6W349 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 KRT16P3-201ENST00000439127 1283 ntBASIC12.54□□□□□ -0.4
LINC00575Q6W349 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 RASSF1-AS1-201ENST00000629828 790 ntBASIC12.54□□□□□ -0.4
LINC00575Q6W349 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 AL390961.4-201ENST00000623958 2535 ntBASIC12.54□□□□□ -0.4
LINC00575Q6W349 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00575Q6W349 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00575Q6W349 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 MIR3621-201ENST00000580529 85 ntBASIC12.53□□□□□ -0.4
LINC00575Q6W349 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00575Q6W349 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00575Q6W349 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00575Q6W349 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00575Q6W349 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00575Q6W349 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms