Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 AC091799.1-201ENST00000422823 811 ntBASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 AC007322.4-201ENST00000509611 723 ntBASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 AL591742.1-201ENST00000604433 565 ntBASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEM53Q6P2H8 AC012313.1-201ENST00000593393 3059 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AC007322.3-201ENST00000426526 701 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AC007322.1-201ENST00000426983 750 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 DUX4L16-201ENST00000555130 1264 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AC092666.2-201ENST00000613287 246 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 AC092437.1-201ENST00000624794 1048 ntBASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TMEM53Q6P2H8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 AIRN-201ENST00000601203 4374 ntBASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 AC080038.1-201ENST00000611274 1154 ntBASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TMEM53Q6P2H8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 AC011484.1-201ENST00000377652 1995 ntBASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TMEM53Q6P2H8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TMEM53Q6P2H8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TMEM53Q6P2H8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms